You are integrating Claude Code into your Continuous Integration/Continuous Deployment (CI/CD) pipeline.

Option D preserves Claude Code’s standard coding-agent instructions while adding the specialized review criteria. Anthropic documents that --system-prompt replaces the entire default system prompt, including its tool guidance, safety instructions, and coding conventions. It does not technically disable tools, but removing that guidance can make the invocation behave like a narrowly scoped text processor. --append-system-prompt retains the default behavior and layers the review instructions on top.

The prompt should explicitly direct Claude to use Read, Glob, and Grep to inspect definitions, callers, tests, and related modules whenever the diff alone is insufficient. Option A is incorrect because --system-prompt is not incompatible with tools. Option B is also inaccurate: --allowedTools pre-approves tool execution; it does not make tools available when -p would otherwise disable them. In this command, --dangerously-skip-permissions already bypasses permission prompts. Option C is false because Claude Code officially supports piped standard input in non-interactive mode. The repaired invocation should therefore use --append-system-prompt and include an explicit repository-exploration requirement. Claude Code programmatic usage , CLI system-prompt reference

================